PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002593.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 260aa MW: 28103.1 Da PI: 9.4482

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002593.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	161	183	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+++F++ L H r+H Cse_sc002593.1_g030.1 161 HECSICHRTFPTGQALGGHKRRH 183 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MALEALNSPA STTTPPPSFH YKDTKFPTTT IIQDTWNKGK RSKRPRSTSN NADSDISSSV 60 SEPQHPTEEE YLAFCLMLLS RGGTGVGSEK PTPTQSPPRP PLVVHKCTVC NKGFGSYQAL 120 GGHKASHRKN TSDDQHHHPT TSNTTTTTSA SSVLKPSGRI HECSICHRTF PTGQALGGHK 180 RRHYDGGNNS GPAASGVTTS EKTSSSTHSQ PRDFDLNLLP VSPLGLNVDF VKKSQLFEEQ 240 EVESPHPAKK QRFSGGVANY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	5e-39	C2H2 family protein