PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002607.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 235aa    MW: 26191.3 Da    PI: 8.8764
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002607.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.14.9e-18154188135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  Cse_sc002607.1_g010.1 154 CQHCLADKTPQWRGGPMGPKTLCNACGVRYKSGRL 188
                            *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MASDPNSCLI DDDDLLNFCL EEDDKNNNNN NKTPSSHPSF PEFAEEELEW LSNKDAFPAL  60
DDILSTPNQT ILVSLLDNNN NTSSSGNSNS ISHSSITSCC GSLRVPLNCP VRKRSTRRRR  120
GKQCWWWNQV VQTPSSFPKA TPAGGVGASI GRRCQHCLAD KTPQWRGGPM GPKTLCNACG  180
VRYKSGRLVA EYRPANSPSF SVALHSNSHR KIMEMRKKMQ AEYARKERNN SRNFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.12e-38GATA family protein