PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002627.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 233aa    MW: 26752.7 Da    PI: 8.7005
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002627.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.12.9e-1587137256
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                             y+GVr++  +g+WvAeIr p     +   r +lg+f  a +Aa a+++ + kl+g+
  Cse_sc002627.1_g050.1  87 LYRGVRQRQ-WGKWVAEIRLP-----HsrSRRWLGTFENAHQAALAYDHEAFKLRGH 137
                            59****999.**********7.....335999***********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MKKVADRAEI SSSSGKNKGK AVCQHKKIKR PEQQHSHSKF VFPFSLDDYP QSMSQSQSSK  60
NQHMISFRSE NKETEHHLHN QQPVPKLYRG VRQRQWGKWV AEIRLPHSRS RRWLGTFENA  120
HQAALAYDHE AFKLRGHKAR LNFPDLFIKD EKQIPAPSLE PCVEQEVKPL LNDSHGSSEQ  180
AGPRNDEGHS VFDTSESLFQ YPAWETLEDG VSNASQGGSS FIWDNFEPSF FNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65130.15e-31ERF family protein