PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002633.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 160aa    MW: 17887.5 Da    PI: 10.1096
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002633.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.3e-104082347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           ++++eE + l  a++ +G+   ++I+r ++ gRt++ +k+ w+ +
  Cse_sc002633.1_g020.1 40 AFSKEENDVLMVAHAVYGNQ-RSKISRFLP-GRTDNRIKNQWHVL 82
                           69****************99.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MYMGSSHYIS SNSVLTLHEL GKSCRLRWVN QLDPRIKICA FSKEENDVLM VAHAVYGNQR  60
SKISRFLPGR TDNRIKNQWH VLTARRHKNV SLGFVIMFPI TYLIHMPSSF PTLAGDALVP  120
DNFMDAAIAG SMRNNSNLPE ALNTSGAQTQ ANPSNIFTPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.12e-26MYB family protein