PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002685.1_g100.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 302aa    MW: 32796.4 Da    PI: 7.7416
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002685.1_g100.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.61.9e-07112133526
                            --SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                             Cr+fartG Ck G  C+F Hg
  Cse_sc002685.1_g100.1 112 VCRHFARTGLCKWGTGCRFVHG 133
                            7********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MTVDAYFGKI ESIATILADL GSPMNDDDLV TYALNGLSDR FAHVAGIIAH RDPFPNLDTV  60
RSMVTTEDLR LKHKATPSTD LTTSSAPTVL LAESSNRDTR SRDTRGNTSQ NVCRHFARTG  120
LCKWGTGCRF VHGNNMQNNA SITHAHNLWS SNYSRQPYNA NGGPTLTNIS NNLHSLGQAQ  180
LVQLVQAQQK MLAQYGLANN LTQAQRVLEA QQQNFKSTRS NKPSPTPPGF STIPAPQAHL  240
SATVHQAQQP APPAQQQVAQ HSPGFAGYNG QETLLPQAFN TLTLQDFGDA GWNMDTGLFD  300
SA