PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002763.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 388aa    MW: 44221.1 Da    PI: 7.1719
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002763.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.11.6e-05146169123
                            EEETTTTEEESSHHHHHHHHHH.T CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                            y C+ Cg+ ++++ +Lk+H +t H
  Cse_sc002763.1_g030.1 146 YICSVCGRKCKTNVELKKHFKTlH 169
                            89******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MNLLCKSIHT LNLNFNPNPY PHPQTPPFKP PHLQCRRPTP PSATSDIDMV PTTPNSQTGT  60
PSFIPKPKKV VILWDLDNKP PRGPPFNAAT SLKTLATHFG ELTDISAYAN RHAFIHLPHW  120
VADQRRQQRK HDILEKHGVI TPTEMYICSV CGRKCKTNVE LKKHFKTLHV KEREKKMNRM  180
RMLKGKKRQR FKERFISGNH KYMEAARSLI VPKTGYGLAG ELRRAGVFVR TVEDKPQAAD  240
WALKRQMMHV IGCGVDWVVL VSDDSDFVEV LRRAKGASLG TVVVGDWDRA LGREADLWVS  300
WSRVENGEIT EEDLVVGRRR SEEFVDEGYD GVFVDGVLDE LVGKRSDFNQ SKVSAFSEGE  360
VVDEEFDEGD ESDYFSDSDD DGEDDWYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-122C2H2 family protein