PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002766.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 287aa    MW: 33037 Da    PI: 6.4134
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002766.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.42.7e-34131052103
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            F+ k+y++++d++l+ +i+w   +nsfvv+++ ef++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g
  Cse_sc002766.1_g060.1  13 FVLKTYQMVNDSSLDAFIRWGIANNSFVVVEPLEFSQRLLPAYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRG 91 
                            9********************888*****************************************999.........*********** PP

                            XXXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkkse 103
                            +++ll++i rkk++
  Cse_sc002766.1_g060.1  92 QTHLLKNIGRKKQT 105
                            ***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MESSNNNDII APFVLKTYQM VNDSSLDAFI RWGIANNSFV VVEPLEFSQR LLPAYFKHNN  60
FSSFVRQLNT YGFRKVDPDR WEFANEWFLR GQTHLLKNIG RKKQTHSSRN NCNSVRFNEE  120
EEDEDEMTLE IERLKHEQKL LEHELVAMNK RLEATERRPE QMMALLHKVA EDPDILPRMM  180
HEKNQRSKNL VDKKRQRMLT PQTTVTTTSP SPSGIKLKEE GEFGMFGGWG VSSPEGYYGN  240
EPFWQSSPSS PTDVVPSGGY RYSSEADGRP PPTFPFSLLG GGFSNSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.16e-71HSF family protein