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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Cse_sc002769.1_g010.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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| Family | B3 | ||||||||
| Protein Properties | Length: 337aa MW: 38609.1 Da PI: 8.6444 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 54.5 | 2.2e-17 | 88 | 178 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88
f k ++ps+vl s +l+lp kf+ +h +e ++t++l desg++++ ++ k + + l++GW++F a++L +gD++ F+l++
Cse_sc002769.1_g010.1 88 FGKCMLPSNVLYSFWLILPSKFCVNHL--PEHDTTIILVDESGKEFKTNY--LKVR--HGLSAGWRGFTVAQRLLQGDILFFRLIEPC 169
66999******************9994..34678****************..5554..55***********************99744 PP
EE..EEEEE-S CS
B3 89 efelvvkvfrk 99
+ l v ++r+
Cse_sc002769.1_g010.1 170 K--LQVNIVRR 178
3..57877775 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 337 aa Download sequence |
MDSNKQTFVE QDSQMMQNLS CEKKKKRKRV VPKEAKDKQI MSDKPKKASG KGKRTKLCDI 60 YNNPEDQYMC MERAATVLET LDEELPKFGK CMLPSNVLYS FWLILPSKFC VNHLPEHDTT 120 IILVDESGKE FKTNYLKVRH GLSAGWRGFT VAQRLLQGDI LFFRLIEPCK LQVNIVRRYD 180 LEAIEAADCL MEMHPRAKKV RVSNYFDSDK AGEPKKERRK WKKVKEEIED ELKHQTPVPV 240 LTTKGKRTKR SPKKFIARFS LDFCSNQRAT NEEEAERVSC ADQCGNSSDG LGSEVLQGST 300 SEMTNQSQAE EDGCYKLNLG CHESTAERIY HSSTVAT |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 23 | 28 | KKKKRK |
| 2 | 23 | 29 | KKKKRKR |
| 3 | 23 | 51 | KKKKRKRVVPKEAKDKQIMSDKPKKASGK |
| 4 | 23 | 53 | KKKKRKRVVPKEAKDKQIMSDKPKKASGKGK |
| 5 | 24 | 52 | KKKKRKRVVPKEAKDKQIMSDKPKKASGK |
| 6 | 24 | 54 | KKKKRKRVVPKEAKDKQIMSDKPKKASGKGK |
| 7 | 25 | 53 | KKKKRKRVVPKEAKDKQIMSDKPKKASGK |
| 8 | 25 | 55 | KKKKRKRVVPKEAKDKQIMSDKPKKASGKGK |
| 9 | 26 | 54 | KKKKRKRVVPKEAKDKQIMSDKPKKASGK |
| 10 | 26 | 56 | KKKKRKRVVPKEAKDKQIMSDKPKKASGKGK |
| 11 | 215 | 223 | KKERRKWKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G42700.1 | 3e-27 | B3 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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