PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002769.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 388aa MW: 44131.2 Da PI: 6.197

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002769.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.3	3.6e-15	72	151	1	86
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k ++ps+vl s + +lp kf+ +h +e ++t++l desg++++ + k + + l++GW++F a++L +gD++ F l++ Cse_sc002769.1_g030.1 72 FGKCMLPSNVLYSFWRILPSKFCVNHL--PEHNTTIILVDESGKEFKTHY--LKVR--HGLSAGWRGFTVAQRLLQGDILFFLLIE 151 66999****************9994..346679***********..5554..55********************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MRTETTLFES SLFVSGNVMI PLRSSNWRIL LKDASVTSIV TPSTVALRAS TVSFVSLFSM 60 VMETLDEELP KFGKCMLPSN VLYSFWRILP SKFCVNHLPE HNTTIILVDE SGKEFKTHYL 120 KVRHGLSAGW RGFTVAQRLL QGDILFFLLI EPCKLQALPF DIDSPMGMKR HKHENNLKNS 180 KWDVVIIIAD SDDEVDLFYW DDVSLWEEDN NNDNSVPLGA IDVVNIVRRY DLEAIEAADC 240 LMEMHPRAKK VRVSNYFDSD KAGEPKKERR KWKKVKEEIE DELKHQTPVP VRTTKGKRTK 300 RSPKKFIARF SLDFCSNQRA TNEEDAERVS CADQCGNCSD GLGSEVLQGS TSEMTNQSQA 360 EEDGCYKLNL GCHESTAERI YHSSTVTT

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MRTETTLFES SLFVSGNVMI PLRSSNWRIL LKDASVTSIV TPSTVALRAS TVSFVSLFSM  60
VMETLDEELP KFGKCMLPSN VLYSFWRILP SKFCVNHLPE HNTTIILVDE SGKEFKTHYL  120
KVRHGLSAGW RGFTVAQRLL QGDILFFLLI EPCKLQALPF DIDSPMGMKR HKHENNLKNS  180
KWDVVIIIAD SDDEVDLFYW DDVSLWEEDN NNDNSVPLGA IDVVNIVRRY DLEAIEAADC  240
LMEMHPRAKK VRVSNYFDSD KAGEPKKERR KWKKVKEEIE DELKHQTPVP VRTTKGKRTK  300
RSPKKFIARF SLDFCSNQRA TNEEDAERVS CADQCGNCSD GLGSEVLQGS TSEMTNQSQA  360
EEDGCYKLNL GCHESTAERI YHSSTVTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	266	274	KKERRKWKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	1e-20	B3 family protein