PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002782.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 177aa    MW: 20762.7 Da    PI: 9.7888
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002782.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK66.34.7e-21448650
                 RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
                           + e +++y+++pi++AAk+ +++ T+ K++CR++GI+RWP+Rk++
  Cse_sc002782.1_g020.1  4 TREIIAQYYYMPIAKAAKKFNIGITIFKKRCRELGIQRWPYRKLT 48
                           66889**************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MAFTREIIAQ YYYMPIAKAA KKFNIGITIF KKRCRELGIQ RWPYRKLTRA KVDGNTQEII  60
TRIQEEKKRE EENLDLEFTK STKRLRQFYF KSKYKRRKSM SLILSLTNQP TTSVATQFQY  120
SSESSSAEHE NIEDGSWAED AEVPSLSGIL HKSLVIHLET IVSQDERIQS YCGKHQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.12e-30Nin-like family protein