PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002810.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 234aa    MW: 25404.7 Da    PI: 9.5125
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002810.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB170.71.6e-5382175194
                  NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 
                            vreqd+flPia +srimkk +Pan+ki+kdaketvqecvsefisf+tseasdkcqrekrkt+ngddllwa+atlGfedy+eplk yl+
  Cse_sc002810.1_g010.1  82 VREQDKFLPIAIISRIMKKGVPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTVNGDDLLWAMATLGFEDYIEPLKSYLS 169
                            69************************************************************************************** PP

                  NF-YB  89 kyrele 94 
                            +yre +
  Cse_sc002810.1_g010.1 170 RYREGD 175
                            ***965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGHGTIAGML KVQKCTKLTN GIDKTQTFAS SSSDLLPRTP AKFYKISISQ ISFGVMMAEG  60
PGSPGGGSHE SGGDQSPRSS NVREQDKFLP IAIISRIMKK GVPANGKIAK DAKETVQECV  120
SEFISFITSE ASDKCQREKR KTVNGDDLLW AMATLGFEDY IEPLKSYLSR YREGDAKGSG  180
KGHEGSSRKD GVQPSLNNAQ VGHQIPYPQS LTYANSQAHT QHMMVPRVSS YPPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.11e-75NF-YB family protein