PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002812.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 220aa    MW: 25844.7 Da    PI: 9.172
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002812.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.11.7e-072570346
                           SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                            WT+e  + +  a + + ++   +W+ +a+ ++ g++++++++ +  
  Cse_sc002812.1_g010.1 25 EWTKEQNKWFESALAIFDTEtpdRWSNVAAFVP-GKSEYEVREQYEE 70
                           7********************************.********99976 PP
2Myb_DNA-binding445e-14123167347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE+ +++ + + +G+g+W+ I+r +  ++t+ q+ s+ qky
  Cse_sc002812.1_g010.1 123 PWTEEEHRRFLMGLQVHGKGDWRNISRNFVVTKTPTQVASHAQKY 167
                            8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
METSSYPSLH VLSSNHMMQD RKSSEWTKEQ NKWFESALAI FDTETPDRWS NVAAFVPGKS  60
EYEVREQYEE LKADINNIEA GLVEVPGYMT FKSEFVQDHG FHTFGNRLLR SRSFDHERRK  120
GVPWTEEEHR RFLMGLQVHG KGDWRNISRN FVVTKTPTQV ASHAQKYYAR QHSDGKEKRR  180
PSIHDITTFN LPRTPPDNGT NMRVYNSGHY FQPTRYQVQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.16e-75MYB family protein