PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002814.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 743aa MW: 84885.1 Da PI: 4.5687

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002814.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.7e-12	677	722	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l+P+ +k + a++L +Av+YIk+Lq Cse_sc002814.1_g020.1 677 SIAERVRRTRISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKELQ 722 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
MLLLQQVLPL LKILDLRESD DLIEICNVSL MPNLETLILC DCRKLVCVCD TLGDHKCVTL 60 LNITGCENLC KGKQPMAFER IQLSVFGGRS TDRPSFQLPI SLKRLFAKDT NLEDTDYFPL 120 TFEDQPCLEY LNLVNSPFKN LPDYTHLKNL LVLDLSFCRK LKTLLNLPSR LAELYTFYCI 180 SLERVTFESH KYTLQEFRYE GCVNLSEVED FFKIVPVAML TGADLGHMNW LRAYQDLEVC 240 LVGDDDLTKG RTLCLQMLYE FSIMSISLPD IEKPNMIPEN EYTSEDPILS FDIPESHRNR 300 NLRGLNLTFK YTLQGDEWVW FAKIRTNNGV DLIYNAKVFG KPAANEVGIW LSYWPIGESL 360 HDGDEVNVSI VVTKGLEIHG CGASLVYTDE EDEIESFEDE IESMVDANEI CEENNEPKID 420 ANEIFEDNDK PFEDNNEHAG ILGADISRYK LSTGTYYLCR RDYSQLMEVG RLTPDWFKNL 480 VGDTIDYTEI GGWRKTGRPD QPYQSFTELK TIGCIIYGPQ LDMDIDKTME PKSSSSIEKT 540 EYSESDSSRL TIQLDKRKDS QGAKRRMAFS SGSHSLSRIP ENEGKTIANS NDGYVDSFGG 600 GSWDMLNDGF MKEFGESDGI SISDNQNDEG RIHVFNSLSY QLSLPTSSIE LSEMEKLPQY 660 QDSVPLIRSR ATTHPRSIAE RVRRTRISER MRKLQDLVPN MDKQTNTADM LDLAVDYIKE 720 LQKQVETLSD HHAKCKCPHK RKL

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

MLLLQQVLPL LKILDLRESD DLIEICNVSL MPNLETLILC DCRKLVCVCD TLGDHKCVTL  60
LNITGCENLC KGKQPMAFER IQLSVFGGRS TDRPSFQLPI SLKRLFAKDT NLEDTDYFPL  120
TFEDQPCLEY LNLVNSPFKN LPDYTHLKNL LVLDLSFCRK LKTLLNLPSR LAELYTFYCI  180
SLERVTFESH KYTLQEFRYE GCVNLSEVED FFKIVPVAML TGADLGHMNW LRAYQDLEVC  240
LVGDDDLTKG RTLCLQMLYE FSIMSISLPD IEKPNMIPEN EYTSEDPILS FDIPESHRNR  300
NLRGLNLTFK YTLQGDEWVW FAKIRTNNGV DLIYNAKVFG KPAANEVGIW LSYWPIGESL  360
HDGDEVNVSI VVTKGLEIHG CGASLVYTDE EDEIESFEDE IESMVDANEI CEENNEPKID  420
ANEIFEDNDK PFEDNNEHAG ILGADISRYK LSTGTYYLCR RDYSQLMEVG RLTPDWFKNL  480
VGDTIDYTEI GGWRKTGRPD QPYQSFTELK TIGCIIYGPQ LDMDIDKTME PKSSSSIEKT  540
EYSESDSSRL TIQLDKRKDS QGAKRRMAFS SGSHSLSRIP ENEGKTIANS NDGYVDSFGG  600
GSWDMLNDGF MKEFGESDGI SISDNQNDEG RIHVFNSLSY QLSLPTSSIE LSEMEKLPQY  660
QDSVPLIRSR ATTHPRSIAE RVRRTRISER MRKLQDLVPN MDKQTNTADM LDLAVDYIKE  720
LQKQVETLSD HHAKCKCPHK RKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	3e-37	bHLH family protein