PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002837.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 264aa MW: 30237 Da PI: 8.138

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002837.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21	8.8e-07	116	135	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C k+F+r+ nL+ H+ Cse_sc002837.1_g050.1 116 FSCHICRKTFNRHNNLQMHM 135 89*****************9 PP
2	zf-C2H2	17.6	1.1e-05	192	214	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +CgksF k + ++H +++ Cse_sc002837.1_g050.1 192 FSCRKCGKSFAVKGDWRTHEKNC 214 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MDFFASSSKP NIPVSEPFDF FKTKDEESFK TLPFFSFLSL EPCKLEKNSN TCNKVEDDDN 60 VTVALHIGLP NQNDNTTAVD DNSYSDNNNI MVANMPANVE YWIPNRSQIL AGFTHFSCHI 120 CRKTFNRHNN LQMHMWGHGS EYRKGAESLR GTQPRVMIGV PCYCCEEECK NNINHPRTLQ 180 THYKRKHGTK QFSCRKCGKS FAVKGDWRTH EKNCGKRWLC VCGSDFKHKR SLKDHIMSFG 240 AGHAPAQPSF QTVELREATT NDIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34790.1	3e-91	C2H2 family protein