PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002847.1_g120.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 190aa    MW: 21868.1 Da    PI: 9.912
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002847.1_g120.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.52.1e-13221071190
                   FAR1  11 GFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                             F +rks++k+  r+g ++++ +vC++eg +++ + +       +k+ rt++   tgCka+ + +++  + k+++t+++ eHnHel 
  Cse_sc002847.1_g120.1  22 RFGIRKSTQKRL-RDGFVKEKYLVCNREGCPKKIRLNtlapkkGDKQVRTSNFRITGCKARAVFHMMPgSRKYRLTTFDVEHNHELD 107
                            699999998887.9999**************998888899887788888999999*************9****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MEIFNLNEVP VGEDSIDLDV TRFGIRKSTQ KRLRDGFVKE KYLVCNREGC PKKIRLNTLA  60
PKKGDKQVRT SNFRITGCKA RAVFHMMPGS RKYRLTTFDV EHNHELDRVE YKHLSKSERK  120
LTYTEQLFII KASNYNIGAT RAHSLYTRLK GSSALVHGTE TEFNNLVRGI NCFIGDSDAQ  180
MLINHCIENL