PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002861.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 139aa    MW: 15868.3 Da    PI: 8.5085
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002861.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.001679101123
                            EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                            ++C +Cg+ F     L  H+r+H
  Cse_sc002861.1_g050.1  79 HECAICGQEFAIGQALGGHMRRH 101
                            78*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MTVKRMLEDD TEIEQMAMAN CLMLLSRVGK TEPDRLFHCK TCNKEFRSFQ ALGGHRASHK  60
RPKLNDFLSQ SSPPKPKTHE CAICGQEFAI GQALGGHMRR HRDEVTGKTI VTKKENVFLD  120
LDLNLTPYEN DLKLWPIVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.11e-35C2H2 family protein