PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002877.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 149aa    MW: 16752.2 Da    PI: 8.0562
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002877.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260124.26.7e-3951041100
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            +C +Ck+ rr+C+ +C++apyfpa++p++fa+vh+++Gasn++k+l++lp + r +a++sl+yeA++r++dPvyG+v++i++l+q+l+
  Cse_sc002877.1_g010.1   5 RCVVCKYFRRRCPLECIFAPYFPADNPQRFAYVHRFYGASNISKMLEELPVHLRANAIESLCYEAKCRMQDPVYGCVRIISSLHQELH 92 
                            6*************************************************************************************** PP

                 DUF260  89 qlkaelallkee 100
                             ++++la++++e
  Cse_sc002877.1_g010.1  93 IARSQLAKTQAE 104
                            ********9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MTSTRCVVCK YFRRRCPLEC IFAPYFPADN PQRFAYVHRF YGASNISKML EELPVHLRAN  60
AIESLCYEAK CRMQDPVYGC VRIISSLHQE LHIARSQLAK TQAEIALLNA SVGVVEPTPS  120
SSESLVQQNG IDHGLDNLVT FGNFTRNLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.14e-49LBD family protein