PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002894.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 207aa    MW: 23081.2 Da    PI: 9.1808
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002894.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH40.54.5e-136993226
                           -S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                           ++++C++++r+G CkyG++C+F+H+
  Cse_sc002894.1_g050.1 69 GEKECPYYMRNGSCKYGPNCRFNHP 93
                           7899********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MDVDAYLRRR YEGQIADIQI VEKEDLDLYF SSSGGFKYGK ACKYNHTKGK SALKPVLEYN  60
FLGLPIRPGE KECPYYMRNG SCKYGPNCRF NHPDPTIGGT YGPATYGNDG HLPLQTAPQP  120
NMPSWSAPRT PNPTAAYVTM MYSPPQNIPI LNSDWNGYQI SDAIENKKVV NKTFKIYNVD  180
RSVCGRVAGA VAKKYGDTRF AGQLSIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48440.17e-43C3H family protein