PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002967.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 117aa    MW: 13712.6 Da    PI: 7.5056
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002967.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.51.9e-1727962089
                   FAR1 20 kkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                           +k k++g+i + +fvC+keg+r+++k++ + ++ +rae+rt+C +++ +  ++  +k+++++l+ eHnH l
  Cse_sc002967.1_g020.1 27 NKYKDDGTISSMRFVCNKEGFRRPDKRD-VLTKCPRAESRTNCLCRMAIIFDNrAKKYKIHDLVPEHNHLL 96
                           455899********************99.9******************9998889**************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MDDIDDMEDS FIQVQEPAQD SNGQWYNKYK DDGTISSMRF VCNKEGFRRP DKRDVLTKCP  60
RAESRTNCLC RMAIIFDNRA KKYKIHDLVP EHNHLLHIPE TVHMMASQRK ISQVQVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-10FAR1 family protein