PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002978.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family BBR-BPC
Protein Properties Length: 183aa    MW: 19896.8 Da    PI: 10.8167
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002978.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind199.92.7e-6140183156301
              GAGA_bind 156 akkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyP 243
                            +++p +  +k +k+k++ks+k++kk     + ++e+k+ +lv ++ ++D s +P+PvCsCtG+ rqC k G+ GW S+CC   +S +P
  Cse_sc002978.1_g050.1  40 STEPDNGPSKTTKNKHSKSRKSKKKTV--LKPNTERKNHNLVFDESKFDFSMVPPPVCSCTGVARQCHKNGTMGWRSSCCSSGMSAFP 125
                            334444444555555555555555555..67889****************************************************** PP

              GAGA_bind 244 LPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                            LP+s+ r+gaR++grKm ++a++klL kLa+eG++ls+pvDLk hWAk Gtn fv i+
  Cse_sc002978.1_g050.1 126 LPMSPSRPGARVGGRKMRHSAYQKLLCKLASEGHNLSHPVDLKAHWAKLGTNNFVIIK 183
                            *******************************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MSETNAGGLS FAHFTTPVTS SNPSQVTYTV AVPIRSVAPS TEPDNGPSKT TKNKHSKSRK  60
SKKKTVLKPN TERKNHNLVF DESKFDFSMV PPPVCSCTGV ARQCHKNGTM GWRSSCCSSG  120
MSAFPLPMSP SRPGARVGGR KMRHSAYQKL LCKLASEGHN LSHPVDLKAH WAKLGTNNFV  180
IIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.31e-48BBR-BPC family protein