PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002997.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 26334 Da    PI: 9.6564
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002997.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.42.4e-30958150
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                           krien++nrqvtf+kRrng+lKKA+ELSvLCdae+ +i+fss+g++yey+
  Cse_sc002997.1_g030.1  9 KRIENNTNRQVTFCKRRNGLLKKAYELSVLCDAEITLIVFSSRGRVYEYA 58
                           79***********************************************8 PP
2K-box99.54.7e-3381172899
                  K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                            s++e +a+ +qqe++kL+++i++Lq+++ hl+Ge+L+ L++keL+qLe++Le++++kiRskKn+++l+++e+lqk+e el+++n  Lr
  Cse_sc002997.1_g030.1  81 STQEINAQFYQQESKKLRQQIQMLQNTNSHLMGENLGCLNVKELKQLETRLERGISKIRSKKNDMILAETENLQKREVELEHHNAFLR 168
                            3778899********************************************************************************* PP

                  K-box  96 kkle 99 
                            +k++
  Cse_sc002997.1_g030.1 169 SKVQ 172
                            *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGRGKIEIKR IENNTNRQVT FCKRRNGLLK KAYELSVLCD AEITLIVFSS RGRVYEYANN  60
NIKSTIERYR KATSSTPSTW STQEINAQFY QQESKKLRQQ IQMLQNTNSH LMGENLGCLN  120
VKELKQLETR LERGISKIRS KKNDMILAET ENLQKREVEL EHHNAFLRSK VQIAESERVH  180
ELNMSSGHAY NALQAYLARN SLHLNIMEPM EDPSAYSIHE KPELHLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.13e-97MIKC_MADS family protein