PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003004.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 171aa    MW: 18971.1 Da    PI: 9.6544
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003004.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.81.8e-08118141226
                            -S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                            kte C++f r G+C+ G++C+F+H+
  Cse_sc003004.1_g060.1 118 KTEVCHNFGR-GFCRWGAQCRFIHD 141
                            9*********.*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MGDQKTDTYF SKIESIITLF NNLGSTMSDD DVVTYTINGL SDKYANLATV IAHKDPFLDL  60
ATMRSMVTTE EIRLKSKAPI LSSNMTSSAR HVLLTKTVPS RSQDSRTTRD RDSRNNMKTE  120
VCHNFGRGFC RWGAQCRFIH DSSRTGTSRN SNSGNSQSNS RNSITSAPGQ C