PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003014.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 239aa MW: 27213.1 Da PI: 9.7271

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003014.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	81	103	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F+++ L H++ H Cse_sc003014.1_g040.1 81 FECHYCHRKFPTSQALGGHQNAH 103 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MEINNPETRN FINVESFSKL PFTRTSRLKE KSIRIFGKEF VSNITTDSST INITDESDSN 60 NTSVIIHEEP KETSNQSNRK FECHYCHRKF PTSQALGGHQ NAHKRERQHA KRAHLHNVMF 120 NGSLNATQMY GLMNYQREIR PYYHHQQLQS WGTVSNAYGL SNAGNNSSRF YGGNASFSSH 180 QTTISSSPLA LWRFPTARNS IFGDGLNVSR IGTEISSQVP YSFEQKSSVQ DQVSLDLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41940.1	3e-34	C2H2 family protein