PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003018.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 309aa MW: 33689.4 Da PI: 8.1443

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003018.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.6e-39	46	107	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+a++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss Cse_sc003018.1_g040.1 46 KEAAINCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 107 67899*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MDTAHWPQEI PIKPIDEIIA QNGTNSCSKP SSNSPSLERR VARPQKEAAI NCPRCNSTNT 60 KFCYYNNYSL SQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNKRSSSSIS SSHSSMSKKL 120 PDLVVPHAPT PLLSQNPRMM HHEHGQDLNL GFPSNNDFKT ISELIQVPNF DATKNTTTST 180 STTSAQQSAL ELLTGLTSRG MMSSFIPIPN PDPNSVYSSS AQMMIPMPEF KIPSLNFSLD 240 GMGGNNGGGG TYGSSIHEGS NGRLLFPFED LKTSTTSTTN DGHHNVDENR DQNGDTNGFW 300 SGMLGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	2e-50	Dof family protein