PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003051.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 252aa    MW: 28622.7 Da    PI: 4.7562
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003051.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-192474255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           +y+GVr+++ +gr++Ae+rdp +  krkr++lg+++t+e+Aa a+++a+ kl g
  Cse_sc003051.1_g070.1 24 RYRGVRRRP-WGRFAAEVRDPEK--KRKRIWLGTYDTPEQAALAYDKAAFKLLG 74
                           7********.**********733..46************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MGLQHGNKKN RKPADEDRQV EWRRYRGVRR RPWGRFAAEV RDPEKKRKRI WLGTYDTPEQ  60
AALAYDKAAF KLLGSRAKVN FPLLIGLDDS SVIMAALSSS KTHVEAPIAT RRREETSETT  120
CYTTTGLSND DVTMDDGSSQ DSTQHFQSDI WFHYNNVLAS SSLPVLESTR TDTITTTTTT  180
KNCDDATIEN DMNLDFQMCT MKPEESYSGS MLQQSSTSVE DPAEEVGTDL DLLWNYDAAI  240
PDDFSFLEFF RK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1848KKNRKPADEDRQVEWRRYRGVRRRPWGRFAAEVRDPEKKRK
22949RRRPWGRFAAEVRDPEKKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.16e-21ERF family protein