PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003059.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 110aa    MW: 12663.5 Da    PI: 8.9352
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003059.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.62.9e-132668347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           ++++eE + l  a++ +G+  W++I+r ++ gRt++ +k+ w+ +
  Cse_sc003059.1_g040.1 26 AFSKEENDVLMAAHAVYGNQ-WSKISRFLP-GRTDNRIKNQWHVL 68
                           69****************99.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
LTLHELGKSF RLRWVNQLDP RIKICAFSKE ENDVLMAAHA VYGNQWSKIS RFLPGRTDNR  60
IKNQWHVLTA RRHKNVVTRL CDHVSGDALV PDNFMDAAIA GDECVNTHHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.13e-26MYB family protein