PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003060.1_g100.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 854aa MW: 95041.8 Da PI: 5.7614

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003060.1_g100.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	46.5	7.4e-15	592	635	2	45
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 ek+isl+++sk++ ++i++AAk+ v+ ++ KriCR +GI RW Cse_sc003060.1_g100.1 592 EKSISLDEISKHYGKTINEAAKNFHVSRSTFKRICRTHGILRWS 635 799****************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 854 aa Download sequence
MWAHKKCPCP FGSNLNRISY TFVPKTRSES KKMNNNNNNI NSPVKNRSNK GSQVLDGLGS 60 RYTCLSEGPQ NNINNLNFNN NNNRKRYLVS LRVYGNREVE DDEPPNSFSE LLADQNIINP 120 QIIKEKITTA LLALCFRDSH VLVQFWSPVI VRKRCLLTTL DQPFGLGVVD EALYLYRLES 180 EQRMFVVDAG HREEIGPPGR VYRQKLPEWS LNAHTLPTRQ SVLDSSASHN THGYLILPVF 240 EPESGCCVGV LELITSSHYV DYAFEVQEIS RALKEVNLKC PNVYEDPTFY THVGDERRQN 300 ELDEIFIALK AICNVHDIPL AQTWALSGYG GAVATSGNLQ QTCSSFNSDC IGKVCMSTYG 360 LPFYVRALSM WRYHEDCRER HLDKSQGVVG KSLSSCGLCL CEDVTKLGED EYPLAPYAHM 420 NGITSCLAIY LKSIEGDAEY VIELVLPPDY TNEADLQSLM KTVKQQIHNA SSLKLGIVSP 480 IQVIGGDPLN WNIESPPSPL TILTEQQDVL PEPGKQPLSE NDRDDVDDVR FSKDQSVVGY 540 LEHMEDDNLN SEPSDSAADG TNQNVVPCLD AGAEDSSDIN KGKMKRKRKR TEKSISLDEI 600 SKHYGKTINE AAKNFHVSRS TFKRICRTHG ILRWSYKSGS DKSDSLLKSN QTDVVAVHAP 660 EGALTPIVEA SSEPLVTTNH SLKQAPKSSL SRMQQQQTTP IVEASSEPLV TTNVSQDHTN 720 HTEHGKQSST LILHQTNLTA GSAQPETSTK EQFIENAAAA NVMKNVTIKA TYKDNTVRFP 780 FTISDGLVNL NELVATRFQL GVGSFRLKYE DADGDMILIA CDSDLMGTVD ETRQPDDQAV 840 IRLFVLPVHH SPDA

Sequence ? help Back to Top

Protein Sequence Length: 854 aa Download sequence

MWAHKKCPCP FGSNLNRISY TFVPKTRSES KKMNNNNNNI NSPVKNRSNK GSQVLDGLGS  60
RYTCLSEGPQ NNINNLNFNN NNNRKRYLVS LRVYGNREVE DDEPPNSFSE LLADQNIINP  120
QIIKEKITTA LLALCFRDSH VLVQFWSPVI VRKRCLLTTL DQPFGLGVVD EALYLYRLES  180
EQRMFVVDAG HREEIGPPGR VYRQKLPEWS LNAHTLPTRQ SVLDSSASHN THGYLILPVF  240
EPESGCCVGV LELITSSHYV DYAFEVQEIS RALKEVNLKC PNVYEDPTFY THVGDERRQN  300
ELDEIFIALK AICNVHDIPL AQTWALSGYG GAVATSGNLQ QTCSSFNSDC IGKVCMSTYG  360
LPFYVRALSM WRYHEDCRER HLDKSQGVVG KSLSSCGLCL CEDVTKLGED EYPLAPYAHM  420
NGITSCLAIY LKSIEGDAEY VIELVLPPDY TNEADLQSLM KTVKQQIHNA SSLKLGIVSP  480
IQVIGGDPLN WNIESPPSPL TILTEQQDVL PEPGKQPLSE NDRDDVDDVR FSKDQSVVGY  540
LEHMEDDNLN SEPSDSAADG TNQNVVPCLD AGAEDSSDIN KGKMKRKRKR TEKSISLDEI  600
SKHYGKTINE AAKNFHVSRS TFKRICRTHG ILRWSYKSGS DKSDSLLKSN QTDVVAVHAP  660
EGALTPIVEA SSEPLVTTNH SLKQAPKSSL SRMQQQQTTP IVEASSEPLV TTNVSQDHTN  720
HTEHGKQSST LILHQTNLTA GSAQPETSTK EQFIENAAAA NVMKNVTIKA TYKDNTVRFP  780
FTISDGLVNL NELVATRFQL GVGSFRLKYE DADGDMILIA CDSDLMGTVD ETRQPDDQAV  840
IRLFVLPVHH SPDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-107	Nin-like family protein