PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003135.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YC
Protein Properties Length: 139aa    MW: 16100.7 Da    PI: 9.1581
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003135.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC50.64.2e-161258144
                  NF-YC  1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaP 44
                           ql+sfw++q   ie+++dfkn  l lar+kki+k+dedv+mis++a 
  Cse_sc003135.1_g040.1 12 QLQSFWANQyqeIENVNDFKNCILTLARVKKIMKVDEDVRMISSKAR 58
                           89******99999******************************9984 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MTQQQQQQVQ QQLQSFWANQ YQEIENVNDF KNCILTLARV KKIMKVDEDV RMISSKARRH  60
VIILSKTKGG HCKKKNDIAA AIMRNEIFDF LVDIFLREDI KEVMTSMPMV NVPFGGPSDT  120
YPYYYMCGVP NLGSRTFGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.33e-30NF-YC family protein