PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003144.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 299aa    MW: 33715.8 Da    PI: 4.443
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003144.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK21.35.3e-071041381145
                 RWP-RK  11 skyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 
                              +F l+ + AA  Lg+   +    CR+ GI+ WP
  Cse_sc003144.1_g050.1 104 VPHFGLSSAYAAEMLGIKKGTFRNVCRNVGIPEWP 138
                            5689******************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MHNYPKDQRP PCEDAIFSRI WGSIAVPVIL NGQCVLVLEF VLDTPMDSYD NIIAEVCRLL  60
ENAGFQSSMK TDCLRRKYIN TNINSRKRMR RTRSLPHTYY FSLVPHFGLS SAYAAEMLGI  120
KKGTFRNVCR NVGIPEWPGT PFKNTRASSA PEIRDSQTIS DTSSFGTLVD DAVSSRNEEK  180
SELSRAETLA PVTLASENQI NQTVPETSLN ANDFSCWWDG GVYEGTLELI IPTNTYALET  240
QINQIVFDTS DPQALPDSQH DGIEYQGNET MAIEDLDLHR FVDSFDYIFE DPPMMTWAA