PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003149.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 235aa    MW: 26020.5 Da    PI: 7.3851
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003149.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.3e-103278354
                           HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                           ++h   Er+RR+riN  ++ Lr+  P +      K +Ka++L+++v+ +k+L
  Cse_sc003149.1_g030.1 32 QKHALSERKRRKRINGHYDSLRQFFPRL-----LKSDKASVLTETVRRLKEL 78
                           7899***********************6.....49************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MNTYNGGDSS SSSDKGLVTV AKLEVMTDLA SQKHALSERK RRKRINGHYD SLRQFFPRLL  60
KSDKASVLTE TVRRLKELKT IITNITSSYN DGDSRSSLFI PGENDEASVN YCDNGGNKAT  120
IQATICCDDR PDLNQDLMEA IQSVGGKVVK AEIATVGGRT KVEVMVEWPE CNGGEEDVLL  180
LRRALKAVVE NRVLGRAGFV RHVFTEPEFI GLGRKSDVYE KIETMLADGL VVRSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.14e-25bHLH family protein