PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003200.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 729aa    MW: 84390.1 Da    PI: 10.054
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003200.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.45.3e-1396183286
                            EEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                     B3   2 fkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                            fk+ +++++ ks+ l++p kf++++       +++  +++ ++ de  r+W  +l  + ++++++l+ GW+e     +Lk+gD+++++
  Cse_sc003200.1_g020.1  96 FKAIMTPYNIKSSTLRFPTKFTRSNgfitedTQNEVVHTKAVIVDEAQRTWPATL--QTSRKQVLLG-GWRELKIKYHLKAGDSCMIE 180
                            79999********************9999885555677899**************..8888777777.******************** PP

                            E-S CS
                     B3  84 ldg 86 
                            l++
  Cse_sc003200.1_g020.1 181 LVK 183
                            875 PP
2B349.86.2e-162373191095
                            HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
                     B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                            ++++ +l+lp  f   +g+k   + +++l++ +grsW+++l  +k +++ ++l+ G k+F++angLk+gD   F+l ++ +++ +vv 
  Cse_sc003200.1_g020.1 237 TFRTPCLYLPVAFSIPNGLK--IG-EMILRNDKGRSWTIQL--KKMGKKyFYLGCGLKDFCNANGLKVGDAYKFELLENeKDKPPVVN 319
                            4455559******9999998..44.7***************..66555569************************9988677777775 PP
3B335.22.1e-11398495499
                            E-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                     B3   4 vltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                            + +++++ +++rl +p kfa+++         +     +k++++ de  r+W  ++  + +s+++ +t   ++    ++Lk+gD+++F
  Cse_sc003200.1_g020.1 398 AVMTPYTIRTSRLNVPLKFARSNglitkrsqtQ---IVNKQIVIIDEAQRTWPATF--KIRSNQVRIT-SLRKLQVKHKLKVGDTCMF 479
                            45799******************7776654322...245689**************..9999999999.9****************** PP

                            EE-SSSEE..EEEEE-S CS
                     B3  83 kldgrsefelvvkvfrk 99 
                            +l++  ++ +v+ ++rk
  Cse_sc003200.1_g020.1 480 ELVK-LGEVPVFNFYRK 495
                            *987.555577777665 PP
4B330.85.2e-10531613792
                            .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                     B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                            ++   ++  l+lp +f  ++g k   + +++l+  + rs +v+l   k++++ + l++G k+F+ +ng+keg +  F+ +++ ++  +
  Cse_sc003200.1_g020.1 531 NHKRITKTGLYLPLEFSISNGFK--LG-EIILRYDNRRSRKVQL--VKHGEKtFKLARGFKDFCVENGIKEGNVYKFEIVEDqKDNPP 613
                            556667777***********877..33.8***************..5555555*************************9988555544 PP
5B358.31.4e-18640720991
                            HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
                     B3   9 dvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                            +  + +rl+lpkkfa+++g+ ++e  +++l++ ++  sW+v+l+ + +s+ +++++GWkeF  angLk+gD + F+l+++ ++ +
  Cse_sc003200.1_g020.1 640 YIVE-KRLYLPKKFARKNGLFNKE--EMILKNvKNEGSWTVELK-SSNSKYCYIGRGWKEFYVANGLKDGDLFKFELVDNgEKPT 720
                            4444.57***********877444..7999997777*******3.4555569************************998645444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    
MDISDKGVFS DAWRKFVMDN GVQEFDFIVF KHQGNMMFDF MVFDQSTCER PHPNLLDEID  60
VQDHIHERSK KSKKRKRNDY SCRKEDKSHL GGDSCFKAIM TPYNIKSSTL RFPTKFTRSN  120
GFITEDTQNE VVHTKAVIVD EAQRTWPATL QTSRKQVLLG GWRELKIKYH LKAGDSCMIE  180
LVKLGEVSVF NFYKLGKKPV RDDHIQLQKE TSLTSKKETN MTSNNHSYFV STLKPCTFRT  240
PCLYLPVAFS IPNGLKIGEM ILRNDKGRSW TIQLKKMGKK YFYLGCGLKD FCNANGLKVG  300
DAYKFELLEN EKDKPPVVNF SLNVDCTMDA EKPIKGSDSI HKLTSFDALD VEEPLTGSDS  360
NYTDQMTKKL KKRKRQDYAS QTKQEFQFQL GKDRSFVAVM TPYTIRTSRL NVPLKFARSN  420
GLITKRSQTQ IVNKQIVIID EAQRTWPATF KIRSNQVRIT SLRKLQVKHK LKVGDTCMFE  480
LVKLGEVPVF NFYRKKPVEN NNQAEVEIDS TIKKETSSTL KSHPYFILTL NHKRITKTGL  540
YLPLEFSISN GFKLGEIILR YDNRRSRKVQ LVKHGEKTFK LARGFKDFCV ENGIKEGNVY  600
KFEIVEDQKD NPPIMNVSLY EDLARGKKNY PYFIGEVKSY IVEKRLYLPK KFARKNGLFN  660
KEEMILKNVK NEGSWTVELK SSNSKYCYIG RGWKEFYVAN GLKDGDLFKF ELVDNGEKPT  720
ANFHFQSIS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1368374KKLKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.14e-51B3 family protein