PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003312.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 205aa    MW: 23519.6 Da    PI: 10.2734
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003312.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.93.9e-1472156390
                   FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                            Y++YA+e GF+v +   k s++n   +k+t   + + ++++  ++ + +rr+ra++r+g +akl+++++ ++kw+v+k+ ++HnH l+
  Cse_sc003312.1_g020.1  72 YKDYAREGGFEVGRGGVKPSTNNV--KKKTNDVKTNESQSHVVNE-VIKRRKRASQRCGFQAKLRIRRTPENKWVVYKFLEKHNHRLV 156
                            9***************99995555..4444444444444444444.88**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MNTTTSDCQG EPSTPISNNN VQHPVIHDDQ SVPQVGSYQP TPEGSKFWVP DAKKKPVEGT  60
EFDTLDIALK GYKDYAREGG FEVGRGGVKP STNNVKKKTN DVKTNESQSH VVNEVIKRRK  120
RASQRCGFQA KLRIRRTPEN KWVVYKFLEK HNHRLVREED YMYLKVARKL SFLQQQLLYH  180
LSNANLGPTR AWKVQYGIGS FYGHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-07FAR1 family protein