PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003379.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ZF-HD
Protein Properties Length: 249aa    MW: 27434.2 Da    PI: 9.0315
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003379.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer69.55.6e-2258111455
            ZF-HD_dimer   4 vrYkeClkNhAasl.GghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRr 55 
                            ++Y  C kNh  s  Gg ++DGCgEfmp ++++ ++a+ l C ACgCHR+FHR 
  Cse_sc003379.1_g010.1  58 ITYGRCTKNHGYSSgGGFVLDGCGEFMPLHTASpSDASFLICDACGCHRSFHRE 111
                            78********987725789**********9999999999**************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MASLPSTIVS SANIRASESE VEPPIRAQPT RMREGPLTFP FLTSDAISGS HHFPTSFITY  60
GRCTKNHGYS SGGGFVLDGC GEFMPLHTAS PSDASFLICD ACGCHRSFHR EILHPLQPVH  120
QVVDYPCPLG GAPDTLSPPL ISSSYYPPPP QPNMYMSFNL AGIPPQNLIN NKNRPSGSGS  180
NQNKDKRFRS KFSKEQKDKM LEFAGKIGWS IQKKNEASVL GFCDAVGVAV TSFKVWIRNN  240
KMKYYWKSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.14e-33ZF-HD family protein