PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003386.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 543aa MW: 60728.1 Da PI: 7.8576

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003386.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.3e-05	378	401	2	23
EETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt..H 23 kC C + F+rk++L+ H+rt H Cse_sc003386.1_g050.1 378 KCVACYRQFNRKEHLVEHMRTsyH 401 6999****************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MLSKRSSNID ESPSTNNPLQ EIQNFILPPS IVPLPKSRKT ARISIRSCCL AKTLSKRSAP 60 PSSPTSTSPS SPIKYHVAGT KGVFYACEPY MNADGLHVTR FLGLGHDSQK FIHAISPTPT 120 SSMSYAEISV KPPNTTLSPY TYVEKSANTH EAGKMSADDA NDSQSRECWF CLSSPNVESH 180 LITSVGENCY CVIAKGPLVQ DHVLILPIEH LPNTLSSPPE CEVELVKFHN SLKAYFNSHK 240 KDVVFFEWVY IKMSHANLQA IPIPDIFNLA AEKLGFKFML TIAGDQSSEG RKLLHAQYDR 300 KCSLFYVELP GGTILSHPVE ENEKFPVQFG PHSYPMLKDQ GITYGSEEGR NGTSCTQGAR 360 DSTKLTINEE DRNGIKNKCV ACYRQFNRKE HLVEHMRTSY HSFHEPMCGY CGKRCRSFES 420 FREHLIGPLP KAECERMFRD HGCDIFLNIF SSRNDVRVHR DTSQLSYGNS GLLHRFASLG 480 IQDELRIDSG KTRAVALACK MVGGGSDGSL DLCAKVCIID EYEDILFQSY VKPHLPVTHY 540 RIK

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MLSKRSSNID ESPSTNNPLQ EIQNFILPPS IVPLPKSRKT ARISIRSCCL AKTLSKRSAP  60
PSSPTSTSPS SPIKYHVAGT KGVFYACEPY MNADGLHVTR FLGLGHDSQK FIHAISPTPT  120
SSMSYAEISV KPPNTTLSPY TYVEKSANTH EAGKMSADDA NDSQSRECWF CLSSPNVESH  180
LITSVGENCY CVIAKGPLVQ DHVLILPIEH LPNTLSSPPE CEVELVKFHN SLKAYFNSHK  240
KDVVFFEWVY IKMSHANLQA IPIPDIFNLA AEKLGFKFML TIAGDQSSEG RKLLHAQYDR  300
KCSLFYVELP GGTILSHPVE ENEKFPVQFG PHSYPMLKDQ GITYGSEEGR NGTSCTQGAR  360
DSTKLTINEE DRNGIKNKCV ACYRQFNRKE HLVEHMRTSY HSFHEPMCGY CGKRCRSFES  420
FREHLIGPLP KAECERMFRD HGCDIFLNIF SSRNDVRVHR DTSQLSYGNS GLLHRFASLG  480
IQDELRIDSG KTRAVALACK MVGGGSDGSL DLCAKVCIID EYEDILFQSY VKPHLPVTHY  540
RIK