PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003405.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 233aa    MW: 26141.7 Da    PI: 10.0413
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003405.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.54.5e-2392183190
                   FAR1   1 kfYneYA..kevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 
                            kfY+eYA  ++vGF++r+++ ++s+ +++i++r++ C+k g+ ++ k++  + r++++++r gC+a++ v+ ++ gkw+vt++ +eH+
  Cse_sc003405.1_g050.1  92 KFYDEYAntRRVGFKMRIDQCRRSEVDKRIISRQLSCNKVGYYTKAKNQFGQIRNQHTSSRQGCNAMMLVRVNEFGKWVVTRFGKEHT 179
                            6*****94458***************************************************************************** PP

                   FAR1  87 Hela 90 
                            H+l+
  Cse_sc003405.1_g050.1 180 HSLV 183
                            *996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MGFPGQNEFE ASELTRPADT NAAPKPRIRA YSFVLHIQKN TAPYQTSSSN LLIRSTQVSS  60
ADVNIAAGLV GNGDVLCVNK HPLQKNRSAA KKFYDEYANT RRVGFKMRID QCRRSEVDKR  120
IISRQLSCNK VGYYTKAKNQ FGQIRNQHTS SRQGCNAMML VRVNEFGKWV VTRFGKEHTH  180
SLVISPCLSL SEGDCKERKI QALTSELKHQ DNQVSMDPVL TLCSNLSSNI TVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.15e-36FAR1 family protein