PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003421.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 449aa MW: 50823.6 Da PI: 6.8141

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003421.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.6	5.1e-36	40	182	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 lp+G++F+Ptd+el+ e+L++kve+k+ + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ Cse_sc003421.1_g010.1 40 LPAGVKFDPTDQELI-EHLEAKVEAKNlkshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRK 122 799**********.99*****6554442...143333666646******.555666799**************7 PP NAM 78 tk........sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++ + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Cse_sc003421.1_g010.1 123 IQtecdlqggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 182 3334555544778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MNISSSDLID AKLEEHQLCG SKQCPGCGHR LEGKPDWVGL PAGVKFDPTD QELIEHLEAK 60 VEAKNLKSHP LIDEFIPTIE GEDGICYTHP EKLPGVTRDG LSRHFFHRPS KAYTTGTRKR 120 RKIQTECDLQ GGETRWHKTG KTRPVMVNGK QKGCKKILVL YTNFGKNRKP EKTNWVMHQY 180 HLGQHEEERE GELVVSKIFY QTQPRQCNWS ERANNNVLSN VIPIEGTNEM NRRESRSGSG 240 SCSSKEINIA TTTTPAHNNM DELSAVSVSA VMSSYNPMDQ MQHLKGVDHF SFAPFRKSFD 300 EVGTTGGEAS TTRDIGVVGG ITCDEHDLQR QQQQNPHQHQ MAFHISRPTH PVSNIILPHQ 360 QAHHHNSIML DEDSFHVSRI MDNFQQQQEQ HHHKMGGGRS TSGLEELIMG CTPSSSTDIK 420 EESSITNHQE ADWLKYSNFW PDPDSHDHH

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MNISSSDLID AKLEEHQLCG SKQCPGCGHR LEGKPDWVGL PAGVKFDPTD QELIEHLEAK  60
VEAKNLKSHP LIDEFIPTIE GEDGICYTHP EKLPGVTRDG LSRHFFHRPS KAYTTGTRKR  120
RKIQTECDLQ GGETRWHKTG KTRPVMVNGK QKGCKKILVL YTNFGKNRKP EKTNWVMHQY  180
HLGQHEEERE GELVVSKIFY QTQPRQCNWS ERANNNVLSN VIPIEGTNEM NRRESRSGSG  240
SCSSKEINIA TTTTPAHNNM DELSAVSVSA VMSSYNPMDQ MQHLKGVDHF SFAPFRKSFD  300
EVGTTGGEAS TTRDIGVVGG ITCDEHDLQR QQQQNPHQHQ MAFHISRPTH PVSNIILPHQ  360
QAHHHNSIML DEDSFHVSRI MDNFQQQQEQ HHHKMGGGRS TSGLEELIMG CTPSSSTDIK  420
EESSITNHQE ADWLKYSNFW PDPDSHDHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-177	NAC family protein