PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003444.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 283aa    MW: 32762.9 Da    PI: 8.5594
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003444.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1752.2e-5491341128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeel+++yL++++ +k++++  +i+evdiyk++PwdLp+k++ +ekewyfF++rd+ky++g r+nra+ sgyWkatg+
  Cse_sc003444.1_g040.1   9 LPPGFRFHPTDEELIMFYLRNQALSKPCPV-AIIPEVDIYKFDPWDLPEKAEFGEKEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGT 95 
                            79****************************.88***************99999*********************************** PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk+++s +++ vg+kk Lvfykgr pkg+ktdW+mheyrl
  Cse_sc003444.1_g040.1  96 DKAIYS-GSKYVGVKKALVFYKGRPPKGVKTDWIMHEYRL 134
                            ******.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MVGKDNSNLP PGFRFHPTDE ELIMFYLRNQ ALSKPCPVAI IPEVDIYKFD PWDLPEKAEF  60
GEKEWYFFTP RDRKYPNGVR PNRAAVSGYW KATGTDKAIY SGSKYVGVKK ALVFYKGRPP  120
KGVKTDWIMH EYRLNESRSQ PTTKKIGSMR LDDWVLCRIY KKKSPERPVE QREGNINNAQ  180
NVPSENQNVV ELQSMNIPRT FSLAHLWELE SLGSISHLLD DHNMNYENNT GIETGATMGI  240
MSQSSSTPYQ GTRLREPHSI KFEENYQNNN ISQPNFYNSM FEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-111NAC family protein