PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003447.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 330aa    MW: 37316.6 Da    PI: 5.3842
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003447.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.33.6e-181461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd +l ++++++G g+W+t ++  g+ R++k+c++rw +yl
  Cse_sc003447.1_g030.1 14 KGPWTPEEDHKLTQYIEKHGAGNWRTLPKNSGLQRCGKSCRLRWINYL 61
                           79********************************************97 PP
2Myb_DNA-binding52.51.1e-1667111147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
  Cse_sc003447.1_g030.1  67 RGRFSFEEEESIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                            89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGRSPCCDKT GLKKGPWTPE EDHKLTQYIE KHGAGNWRTL PKNSGLQRCG KSCRLRWINY  60
LRPDIKRGRF SFEEEESIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLKNG  120
IDPVTHSPRL DLMDLSSLLN SASFNLSNLL NIQSLVNPQV LRLAALLASS SSNLEHKELF  180
HNNTIPSMNP NSNEQTADVT STPSLWNQAH QMQVKNGQCF SDNLVISSND QTCQENLMPS  240
YLNDNSNILP NYNNQFTSQA SEDSSFQLSN TDTNEFDIDS IFPTPISSAT PLDSSSMLIN  300
GSTTEEEIES YCNKIFEFEI PDNLQFNDLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-85MYB family protein