PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003530.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 233aa    MW: 26036.2 Da    PI: 4.0884
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003530.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.41e-193683147
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS.EEE CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg.kly 47
                           k+ie k  rqvtfskRr+g++KKA EL+ L++a+va+++ s+ g k+y
  Cse_sc003530.1_g040.1 36 KKIEKKDSRQVTFSKRRTGLFKKAAELCLLTGAKVAILVNSPGGgKVY 83
                           689**************************************9642666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVSSRSASFD GTIVNNTITT TINKKTSKGR QKIEIKKIEK KDSRQVTFSK RRTGLFKKAA  60
ELCLLTGAKV AILVNSPGGG KVYVFDEYDL IDRYLNDVVE TGRLGFPKFD QELVVEEEDE  120
MDIGKLEEYV SSLEEMKEDA LAEADALTMN GNIPALLDLD EMKKDEVTEA SDSVVIDNNE  180
AVLDSDLSLD MSWLDSDLLD MSWLDSVSFD SLLDIDETNT HDTFNLNFHG VEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-15M-type_MADS family protein