PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003530.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YC
Protein Properties Length: 147aa    MW: 16504.7 Da    PI: 9.7081
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003530.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC36.21.3e-11531331999
                  NF-YC  19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                             ++P+ r+ +i+k+++   +i+ ea  ++ ka e f+  +t  ++  a   +++ +    ++++v + + fdfl d vp++
  Cse_sc003530.1_g050.1  53 YNIPMQRVSRIIKSEDPNIRITQEALFVVNKASEKFLQLFTTEAYAAAFLDRKKQIDYKHLSSVVGKRKRFDFLADFVPEK 133
                            579**********9988889**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MTKPKPKLTK TDDVTPTTTT TTSPHSNGTN SKPDDVITTD NNNNSVNGNS ILYNIPMQRV  60
SRIIKSEDPN IRITQEALFV VNKASEKFLQ LFTTEAYAAA FLDRKKQIDY KHLSSVVGKR  120
KRFDFLADFV PEKVKAEDAL KEVPTTD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104122RKKQIDYKHLSSVVGKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.12e-27NF-YC family protein