PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003546.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 213aa    MW: 23921.2 Da    PI: 8.5013
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003546.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.11.3e-151257147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g WT+eEd +l+++v+  G ++W+   + ++ gR++k+c++rw + 
  Cse_sc003546.1_g050.1 12 KGLWTPEEDAKLIQLVETQGARNWSVLGSSIP-GRSGKSCRLRWCNQ 57
                           678*****************************.***********985 PP
2Myb_DNA-binding51.32.7e-1666108347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+ Ed+++++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc003546.1_g050.1  66 PFTPHEDDIILRAHVIHGNK-WSVISKLLP-GRTDNAIKNHWNST 108
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MKSNEGVNLF KKGLWTPEED AKLIQLVETQ GARNWSVLGS SIPGRSGKSC RLRWCNQLCP  60
NVQHRPFTPH EDDIILRAHV IHGNKWSVIS KLLPGRTDNA IKNHWNSTLK RRGLSRSSES  120
ESTQSDDNEG LKNKRRRCVS VSVSDVSSCD EMTLLTLLPP GDDGEKKKDG DDEDTCLVDV  180
MKRMIAKEVR SYVDVLRAKD CLSFGPVLHP VTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.14e-47MYB family protein