PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003553.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 206aa MW: 23812.2 Da PI: 10.1321

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003553.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.6	6.2e-16	56	158	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...............tekerrtraetrtgCkaklkvkkek. 72 ++Y+ YA + F vrks skk ng++t++ Cs+ gk+++ ++ ++k++r+ ++t t+Cka++ +k Cse_sc003553.1_g020.1 56 NMYKVYAAKGRFGVRKSGSKKW--NGKVTHKYVICSRGGKPRKIAETntlmedvqendnvdgKTKRKRRFSTTLTDCKAMICLKVIPg 141 58*************99988..999***********9988899*******98888888888999*********9 PP FAR1 73 dgkwevtkleleHnHel 89 ++k+e+++ ++HnH+l Cse_sc003553.1_g020.1 142 TNKYELYDWTENHNHPL 158 *************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MHVKLLSEDD VDVDFFDLDP EFIPTPNGSS YWVPNIPVDE KPKKGTRFDT FQEAVNMYKV 60 YAAKGRFGVR KSGSKKWNGK VTHKYVICSR GGKPRKIAET NTLMEDVQEN DNVDGKTKRK 120 RRFSTTLTDC KAMICLKVIP GTNKYELYDW TENHNHPLIV QSNMDLSRAR RKLQYGDYMF 180 IHRASLTSIG AQKAHRIRVA SWHKQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	7e-07	FAR1 family protein