PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003591.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HB-other

Protein Properties

Length: 1069aa MW: 116176 Da PI: 5.343

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003591.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	18.7	3.1e-06	13	75	6	56
S--HHHHHHHHHHHHHSS..S--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknr..ypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56 +ft+ ++ e+e+ + n+ p ++ LA+k +++ +qV +WFqNrR+ k Cse_sc003591.1_g030.1 13 RFTPPEIAEMEAILQANHiaVPERQILVSLAEKFsateerkgkmEVQMKQVWNWFQNRRYAIK 75 588888888888888754226888888889998888899999889**************9766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1069 aa Download sequence
MGRPPSNGGP SFRFTPPEIA EMEAILQANH IAVPERQILV SLAEKFSATE ERKGKMEVQM 60 KQVWNWFQNR RYAIKSKIGK SPGKLDVTQM PRDNSAMVKP APQPTQPLAA STATVKTLPQ 120 APQHPTVPAA SVRTFPQAPQ HPPAFSAPSL GRFTDNSQME YEAKSARDGA WYDVSTFLSH 180 RAIDTGDPEV LVRFAGFGAE VLLTQLQAFL VRQRSLPCEA SECVAVLPSD LILCFQEGKE 240 QALYFDAHVL DAQRRRHDVR GCRCRFLVRY DHDQSEEIVA LRKICRRPET DYRLQQLHAA 300 NESISANQNK NGTNNNSTVN TLRVYPPAEV QPKQQKVEHV APSAPAEAPQ KRQRLDSTVP 360 PEGSQMKANV EPVAPGAPPG FVPLNQQRVQ AAVPAPSVQL SVQPQKVDTV VPPSSNQAPL 420 EPKKVEPAVS APVDKIETTV PSSGKANQEL QTASQEPEAA GPTVPASTKE SPTIVAPSAD 480 VPAEAPAESI ERKLEVAELP KEPVVYVSSV EVPTELQVQT ATKTEEPVGP VSTNDTNASV 540 STDDPKVVQE LAETKPEEPM VPISTDDPNM VQDAIKTNTE EPVAPVSANV VGEATEAKIE 600 EPAVPANDPM AIEAENEQPK LSETMDSNES HAKDEEIPSD NKIENSDTAP ENAAVAMEEG 660 YEQPPPPPPL RIQTETRPPS LPHSLKHPPP HHFSDHNKQT DNCTMTSLHR FKTTNNNITE 720 FKLGYGIRNI VTTCRAVLLP RFGNADVMEI RDDVRVPDLK DDDVLVRVRA VSVNPLDTRM 780 RAGYGRSLFE SLLPLVLGRD VSGEVAAVGA SVQTLNVGQE VFGALHPTAV RGTYADYAVL 840 AEDQLTPKPS TISHVEASAI PFAALTAWRA LKSTARITKG QRVLVIGGGG AVGFSAIQLA 900 VATGCAVSST CESESIERLL AAGAEQALDY TAEDLEVTLK GHYNAVLDTI GIQQTEKLGI 960 SLLKRGGHYM TLQGESAKLT DRYGLAVGLP TATAILLKKQ MQYRLSHGIE YWWTYMRTDA 1020 EGLDEIRRLT AAGKLKVPVE KTFPITQVCE AHDAKDKRII PGKVVLEVD

Sequence ? help Back to Top

Protein Sequence Length: 1069 aa Download sequence

MGRPPSNGGP SFRFTPPEIA EMEAILQANH IAVPERQILV SLAEKFSATE ERKGKMEVQM  60
KQVWNWFQNR RYAIKSKIGK SPGKLDVTQM PRDNSAMVKP APQPTQPLAA STATVKTLPQ  120
APQHPTVPAA SVRTFPQAPQ HPPAFSAPSL GRFTDNSQME YEAKSARDGA WYDVSTFLSH  180
RAIDTGDPEV LVRFAGFGAE VLLTQLQAFL VRQRSLPCEA SECVAVLPSD LILCFQEGKE  240
QALYFDAHVL DAQRRRHDVR GCRCRFLVRY DHDQSEEIVA LRKICRRPET DYRLQQLHAA  300
NESISANQNK NGTNNNSTVN TLRVYPPAEV QPKQQKVEHV APSAPAEAPQ KRQRLDSTVP  360
PEGSQMKANV EPVAPGAPPG FVPLNQQRVQ AAVPAPSVQL SVQPQKVDTV VPPSSNQAPL  420
EPKKVEPAVS APVDKIETTV PSSGKANQEL QTASQEPEAA GPTVPASTKE SPTIVAPSAD  480
VPAEAPAESI ERKLEVAELP KEPVVYVSSV EVPTELQVQT ATKTEEPVGP VSTNDTNASV  540
STDDPKVVQE LAETKPEEPM VPISTDDPNM VQDAIKTNTE EPVAPVSANV VGEATEAKIE  600
EPAVPANDPM AIEAENEQPK LSETMDSNES HAKDEEIPSD NKIENSDTAP ENAAVAMEEG  660
YEQPPPPPPL RIQTETRPPS LPHSLKHPPP HHFSDHNKQT DNCTMTSLHR FKTTNNNITE  720
FKLGYGIRNI VTTCRAVLLP RFGNADVMEI RDDVRVPDLK DDDVLVRVRA VSVNPLDTRM  780
RAGYGRSLFE SLLPLVLGRD VSGEVAAVGA SVQTLNVGQE VFGALHPTAV RGTYADYAVL  840
AEDQLTPKPS TISHVEASAI PFAALTAWRA LKSTARITKG QRVLVIGGGG AVGFSAIQLA  900
VATGCAVSST CESESIERLL AAGAEQALDY TAEDLEVTLK GHYNAVLDTI GIQQTEKLGI  960
SLLKRGGHYM TLQGESAKLT DRYGLAVGLP TATAILLKKQ MQYRLSHGIE YWWTYMRTDA  1020
EGLDEIRRLT AAGKLKVPVE KTFPITQVCE AHDAKDKRII PGKVVLEVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-105	HB-other family protein