PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003683.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 307aa    MW: 33400.5 Da    PI: 10.8974
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003683.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK24.65.1e-081671961746
                 RWP-RK  17 pikdAAkeLgvclTvLKriCRqyGIkRWPh 46 
                            + ++AA   gv+ + LKriC  +GIk WPh
  Cse_sc003683.1_g070.1 167 SFEEAADIFGVSRSKLKRICTSLGIKGWPH 196
                            5689*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MSNGVIHSKA RNSLALGKHP PYLKMVSDAI VTLKERNGSS QYAIRKFIQD KHKDHLPANF  60
KKMLLSQLKK LVASDKLVKV KASYKLPSAA KPKPKPAAKP KPAAKNNAPA KKKPAAKTKP  120
DAKAKPASNA KPAAEMVTKK APAKKKPAKA KAGSVKAAAK PNLTPNSFEE AADIFGVSRS  180
KLKRICTSLG IKGWPHTPNK SETILIDELG HPKTTLKNSV KPLTIKATYK ENIVRFPFIL  240
SDGLTKLKEQ IAARFPLKLG SFKLKYEDKA GDLILIACDT DLDLSADDFR RPDGHTVIRL  300
VVCLLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.11e-11Nin-like family protein