PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003694.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 189aa MW: 20739.2 Da PI: 7.5716

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003694.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	7.1e-39	18	75	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +++++cprCdstntkfCyynny+lsqPr+fCk+CrryWtkGG+lrn+PvGg++rk k Cse_sc003694.1_g020.1 18 HEHINCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGTLRNIPVGGATRKITK 75 6789**************************************************9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MNETTITTTN NLIKFPEHEH INCPRCDSTN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGT 60 LRNIPVGGAT RKITKPKAKK QHVMTSSQSS LSAPVQNNNP QVEMKVEHEQ EHVHGHEEVF 120 NGFGNLLMGV GPMGGFGSLL MDGGDVASEE VLIRNPNVGG ENDGAGAGAG AEMNGWPDLS 180 IFTPGSSFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	4e-36	Dof family protein