PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003701.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 231aa    MW: 25580.8 Da    PI: 8.2324
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003701.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.61.1e-161661147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+WT+eEd +l+++v+  G ++W+ I + ++ gR++k+c++rw + 
  Cse_sc003701.1_g040.1 16 KGSWTPEEDAKLIHLVETQGARNWSIIGSSIP-GRSGKSCRLRWCNQ 61
                           799*****************************.***********985 PP
2Myb_DNA-binding51.72.1e-1670112347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+eEd+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc003701.1_g040.1  70 PFTPEEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 112
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MTSSSSNDDV NLLKKKGSWT PEEDAKLIHL VETQGARNWS IIGSSIPGRS GKSCRLRWCN  60
QLSPNIHHRP FTPEEDDVIL RAHLIHGNKW SVISKLLPGR TDNAIKNHWN STLRRRGLTR  120
SSESESTQSD DDDGLGKNKR RRCVSVSVSM SDVSSCDGMT VLTLLPPGDG ERKKGGGDEV  180
EKGTVEIDDT CLVDVMRKMI AKEVRSYIDE LRAKDGLSFG AVLRPVAQQS E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-35MYB family protein