PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003701.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 217aa MW: 23884.8 Da PI: 6.5153

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003701.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.1	2.4e-14	14	54	1	42
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcks 42 +g+WT+eEd +l+++v+ G ++W+ I + ++ gR++k+c++ Cse_sc003701.1_g070.1 14 KGSWTPEEDAKLIQLVETQGARNWSVIGSSIP-GRSGKSCRL 54 799***************************.*****95 PP
2	Myb_DNA-binding	47.3	4.8e-15	64	105	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T+ Ed+ +++a+ +G++ W+ I++ ++ gRt++ +k++w++ Cse_sc003701.1_g070.1 64 FTPHEDDVILHAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 105 8****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MTSSSNEDVN LFKKGSWTPE EDAKLIQLVE TQGARNWSVI GSSIPGRSGK SCRLPQPQRP 60 TPLFTPHEDD VILHAHLIHG NKWSVISKLL PGRTDNAIKN HWNSTLRRRG LTLTRSSSES 120 ESTHSDDDNE GLGLKNKKRR CVSVSDVSSC DGMTLLTLLP PGGGEKDKGD DEVEKGTVEI 180 EDTCLVDVMK KMIAKEVRSY IDELRAKDGL SFGSTAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	140	LKNKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	4e-33	MYB family protein