PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003725.1_g120.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 311aa    MW: 35095.6 Da    PI: 7.113
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003725.1_g120.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM180.93.3e-5651311129
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeel+++yL +kv++++++  ++++evd++k+ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat +gyWk+tgk
  Cse_sc003725.1_g120.1   5 LPPGFRFHPTDEELITFYLSHKVSDSSFSS-KAVAEVDLNKCEPWDLPAKASMGEKEWYFFSLRDRKYPTGLRTNRATVAGYWKTTGK 91 
                            79*************************999.88***************999999********************************** PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                            dke+++ +g lvg+kktLvfy+grapkgekt+Wvmheyrle
  Cse_sc003725.1_g120.1  92 DKEIFR-GGVLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 131
                            ******.********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEDTLPPGFR FHPTDEELIT FYLSHKVSDS SFSSKAVAEV DLNKCEPWDL PAKASMGEKE  60
WYFFSLRDRK YPTGLRTNRA TVAGYWKTTG KDKEIFRGGV LVGMKKTLVF YRGRAPKGEK  120
TNWVMHEYRL ENSHAFKPNK EEWVVCRIFQ KSAIAKKPMP TVSSPQSMDS PCDTNTIAND  180
YGDIELPNLN GIAGSSSNIS LPNYGMETNL NTNMNLNMSL ASGLSSLAWP SSILSSNLSM  240
NALLLKALQL RTFQQREAAN LDYEFMPQGN SHFLGEASPS LQASSSRTYE CLQQQQQQHQ  300
SEQPFNLDSM W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-97NAC family protein