PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003732.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 100aa MW: 11504.2 Da PI: 9.4009

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003732.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.7	2.3e-12	6	48	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+W++eEde l +++ ++G++ W +I++ + gR+ +c sr+++ Cse_sc003732.1_g060.1 6 GPWSPEEDEMLRNLIGKHGSN-WPLISKSIS-GRSSDSCWSRLLS 48 89***************99.*****.********986 PP
2	Myb_DNA-binding	34.7	4.1e-11	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed l ++v+++G + W++I++ ++ g +++ c +r++ Cse_sc003732.1_g060.1 52 SFTPKEDRMLQNLVEKHGHN-WSLISNSIP-GTSANTCHLRLRRT 94 79**************88.*****.********9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 100 aa Download sequence
MDQIEGPWSP EEDEMLRNLI GKHGSNWPLI SKSISGRSSD SCWSRLLSLY LSFTPKEDRM 60 LQNLVEKHGH NWSLISNSIP GTSANTCHLR LRRTRLIMKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	2e-11	MYB family protein