PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003732.1_g110.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 256aa    MW: 28887.6 Da    PI: 9.9422
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003732.1_g110.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.25e-154789145
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                           +g+W++ Ede l ++v+++G++ W+ I + ++ gR++k c+ rw+
  Cse_sc003732.1_g110.1 47 KGPWSPKEDEMLQNLVEKHGPN-WSVIGKFIP-GRSAKTCRVRWF 89
                           79******************77.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MESDESGVIK LKNKTSLSKY RLRRKKGLRL AMSSVNNSQK KDMDPIKGPW SPKEDEMLQN  60
LVEKHGPNWS VIGKFIPGRS AKTCRVRWFS SPQVMPFTPE EDHTILLSHA YYGDKWVSIA  120
KKLTGRPYDV IQNHWNSTLK WKSSSMTNEA KIPPPFVSDI NCGQGNSYIC DCNLSLAVAP  180
SISDMTRDNM SSGGTHSYSS DHSAPSRDAL RKRDSSQIMS DSDNSSEVSS FEPVRPSQLN  240
RVSFEKRAKM SRFFEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.13e-41MYB family protein